TA-SI Prediction Tutorial (updated)

Welcome to the Ta-SI Prediction tutorial

This tutorial covers usage of the Ta-SI prediction tool for all versions of the small RNA Workbench past 2.5

If you wish to complete the tutorial yourself, please download the files found here and follow the video tutorial.

Alternatively just watch the video below to get an idea of how to use the sRNA Workbench to detect phased sRNA Loci and how to produce images of each locus.

profiling miRNA Sequences in NGS data

Data used in the tutorial:

sRNA Files:
GSM118373_Rajagopalan_col0_leaf_nr.fa
(found in the TutorialDataV3 download in: TutorialData/FASTA/RNAOME)

Genome file:
Ath_TAIR9.fa
(found in the TutorialDataV3 download in: TutorialData/FASTA/GENEOME)





Download Video:
Closed Format: “MP4”
Open Format: “OGG”

A suite of tools for analysing micro RNA and other small RNA data from High-Throughput Sequencing devices