miRProf Tutorial (Legacy)

Welcome to the miRProf tutorial

(This tutorial is for the legacy version of this tool, a link to the tutorial for the current version can be found here.)

If you wish to complete the tutorial yourself, please download the files found here and follow the video tutorial.

Alternatively just watch the video below to get an idea of how to use the sRNA Workbench to detect and profile known miRNAs found in miRBase in multiple Next Generation Sequence data samples.

profiling miRNA Sequences in NGS data

Data used in the tutorial:

sRNA Files:
GSM118373_Rajagopalan_col0_leaf_nr.fa
GSM154336_carrington_col0_flower_nr.fa
(found in the TutorialData download in: TutorialData/FASTA/RNAOME)

Genome file:
Ath_TAIR9.fa
(found in the TutorialData download in: TutorialData/FASTA/GENEOME)





Download Video:
Closed Format: “MP4”
Open Format: “OGG”

A suite of tools for analysing micro RNA and other small RNA data from High-Throughput Sequencing devices