F. Schwach, S. Moxon, V. Moulton and T. Dalmay: Deciphering the diversity of small RNAs in plants: the long and short of it. Briefings in Functional Genomics and Proteomics 2009 free online access

High-throughput sequencing of Medicago truncatula short RNAs identifies eight new miRNA families. Szittya, G.; Moxon, S.; Santos, D. M.; Jing, R.; Fevereiro, M. P. S.; Moulton, V. & Dalmay, T. BMC Genomics, Vol. 9, pp. 593,2008

Deep sequencing of tomato short RNAs identifies microRNAs targeting genes involved in fruit ripening. Moxon, S.; Jing, R.; Szittya, G.; Schwach, F.; Pilcher, R. L. R.; Moulton, V. & Dalmay, T. Genome Res, Vol. 18, pp. 1602-1609, 2008

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S. Moxon, F. Schwach, D. MacLean, T. Dalmay, D. J Studholme, and V. Moulton: A toolkit for analysing large-scale plant small RNA datasets. Bioinformatics 2008 free online access

Identification of novel small RNAs in tomato (Solanum lycopersicum). Pilcher, R. L. R.; Moxon, S.; Pakseresht, N.; Moulton, V.; Manning, K.; Seymour, G. & Dalmay, T.